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Loci: Our proprietary software solution

for your microbial omics data

 

Server or Cloud

Why Loci?

 

  • Accelerates "Time to Market" for your microbial innovations by saving time for scientists and bioinformaticians.

 

  • Increases value to your organizations by serving as a repository for all your microbial omics data including historical data saving data preparation time and drives new innovations.

 

  • Saves cost through increased efficiency by empowering biologists with "anywhere and anytime" access, analyze and visualize, exclusively, microbial omics data and frees up bioinformaticians'  time.

 

Groundbreaking Data Management Platform

 

  • Enables organization of thousands of public (e.g. NCBI) and proprietary microbial genomes in a single platform, and seamlessly scales as the data size increases.

 

  • Flexible to be installed either behind the firewall in your internal servers or in the cloud (e.g. Google_GCP , Amazon_AWS).

 

  • Stores annotated sequence data from all sequencing platforms

Interactive Microbial Search and Exploration

 

  • Provides interactive search features to retrieve and explore the data from public and proprietary ones using various keywords (e.g. genus, species, domains, genes, proteins etc.).  

 

  • e.g. 1) Find all genomes that belongs to a certain taxonomy rank (i.e. genus Bacillus); 2) Find all genes and proteins that contain a domain of interest.

 

  • Search >500 million data-points and get the results in a few seconds

Flexible BLAST/Custom BLAST Analyses

 

  • Best-in-class flexibility for your BLAST analyses.

 

  • Scientists can easily select a query using countless options based on taxonomy or collection type (public or private) and choose a myriad of databases, including public databases like NCBI nr/nt, NCBI patent database and proprietary for this analysis.

Interactive Genomics Data Visualization

 

  • Integrated JBrowse for interactive visualization of the genomes and annotations. No additional installation required!